Research Interests
Relevant Thesis-Based Degree Programs
Graduate Student Supervision
Doctoral Student Supervision
Dissertations completed in 2010 or later are listed below. Please note that there is a 6-12 month delay to add the latest dissertations.
Enhancing privacy and efficiency in AI models through data-oriented learning strategies (2025)
The rapid development of Artificial Intelligence (AI) is transforming how we work, live, and innovate. Despite achieving impressive performance, AI models face challenges in reliability, privacy, and efficiency for real-world deployment. This thesis addresses these concerns through two main objectives: 1) tackling data privacy and heterogeneity via federated learning (FL), and 2) auditing data usage and quality during both pre-training and post-training stages. Efficiency is also emphasized to ensure practical applicability.All solutions in this thesis share a data-centric view, grounded in the belief that AI models are shaped by data and can, in turn, reveal information about it. To enhance privacy and efficiency, we first improve heterogeneous FL with new frameworks such as FedLGD and DeSA. These methods use virtual data to overcome challenges like heterogeneity, asynchronization, and decentralized coordination, leading to more robust and scalable FL systems. Both theoretical analysis and empirical results support their effectiveness.Then, we shift to data auditing, critical for ensuring data quality and ethical use. For post-training analysis, we introduce EMA, a method that combines membership inference with statistical ensembles to verify training data legitimacy. For pre-training assessment, EXAMINE leverages self-supervised learning to evaluate data quality. These methods enhance the robustness and accountability of AI systems, particularly in sensitive fields like healthcare.Finally, we propose future research directions that aim to improve scalability and adapt our work to emerging model architectures, enabling broader applicability in resource-limited and multimodal settings.In summary, this thesis offers a comprehensive approach to building trustworthy and efficient AI systems through innovations in federated learning and data auditing. By adopting a data-oriented perspective, it addresses key challenges in privacy, scalability, and accountability. The proposed methods, validated both theoretically and empirically, demonstrate strong potential for real-world impact, especially in ethically sensitive domains.
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Master's Student Supervision
Theses completed in 2010 or later are listed below. Please note that there is a 6-12 month delay to add the latest theses.
Overcoming catastrophic forgetting in heterogeneous federated learning (2025)
Federated learning (FL) has gained prominence in the medical domain for enabling collaborative machine learning across decentralized datasets while preserving patient privacy. However, key challenges such as catastrophic forgetting and local overfitting hinder the effectiveness of FL models in heterogeneous healthcare environments. This thesis addresses these challenges through two complementary studies. The first study introduces Federated Impressions, a synthetic data generation method that extracts the knowledge of the global model without compromising privacy. By training the local model on these impressions, the method mitigates catastrophic forgetting, allowing the model to retain critical knowledge while generalizing effectively across diverse datasets. This approach ensures robustness and adaptability to evolving medical data distributions. The second study enhances FL for medical imaging by leveraging Vision Transformers (ViTs) in a DualPrompt architecture. Prompts are divided into shared and group prompts: shared prompts capture generalized medical features and are trained exclusively on Federated Impressions alongside local data to prevent overfitting, while group prompts adapt to specific client tasks using local data. This method effectively mitigates catastrophic forgetting, preserving personalization through group prompts while maintaining global generalization via shared prompts. It strikes a balance between retaining global medical knowledge and adapting to localized data distributions. Experimental evaluations on benchmark medical datasets demonstrate that the proposed approaches improve global generalization by avoiding local overfitting. These advancements make FL more robust and effective in heterogeneous medical environments, addressing critical challenges in privacy, scalability, and catastrophic forgetting. This thesis lays the groundwork for scalable and adaptive FL frameworks tailored to medical applications, fostering innovation in privacy-preserving healthcare AI.
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Towards trustworthy and explainable AI: applications in healthcare (2025)
The rapid advancement of foundation models in medical imaging represents a significant step toward improving diagnostic accuracy and personalized treatment. However, the deployment of these models in healthcare requires a rigorous examination of their trustworthiness, which includes aspects such as privacy, robustness, reliability, explainability, and fairness. Despite their potential, the current literature on foundation models in medical imaging reveals notable gaps in addressing trustworthiness, particularly regarding segmentation, medical report generation, medical question answering (Q&A), and disease diagnosis. To address this, we conduct a comprehensive survey that analyzes existing research, identifies challenges, and proposes research directions to build more trustworthy foundation models. Our review highlights the critical need for a balanced approach that advances innovation while ensuring ethical and equitable healthcare delivery.Building on this, we explore the explainability of machine learning models in predicting antimicrobial use within electronic health records (EHRs). Using a dataset of 10,816 patients from the Vancouver Coastal Health Community (2019–2022), we developed seven machine learning models to predict antimicrobial use as a proxy for wound infection risk. The SHAP method wasemployed to interpret model predictions, identifying key risk factors such as specific wound bed characteristics and high frequency of dressing change. The findings demonstrate the value of explainable AI in enhancing clinical decision-making and trustworthiness in healthcare.Collectively, this thesis bridges the critical gap between trustworthiness and explainability in AI applications for healthcare. The work contributes to a holistic understanding of deploying AI responsibly while addressing ethical and clinical considerations.
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Differentially private neural tangent kernels for privacy-preserving data generation and distillation (2024)
With the increasing interest in Deep Learning, data safety issues have become more prevalent as we rely more on Artificial Intelligence. Adversaries can easily obtain sensitive information through various attacks, this dramatically discourages patients and clients from contributing invaluable data that may be beneficial to research. This problem facilitates the need for a gold standard privacy notion. In recent years, Differential Privacy (DP) has been recognized as a gold standard notion of privacy. Among the current popular DP methods, Maximum mean discrepancy (MMD) is a particularly useful distance metric for differentially private data generation. When used with finite-dimensional features it allows us to summarize and privatize the data distribution once, which we can repeatedly use during generator training without further privacy loss. An important question in this framework is, then, what features are useful to distinguish between real and synthetic data distributions, and whether those enable us to generate quality synthetic data. This work considers using the features of neural tangent kernels (NTKs), more precisely empirical NTKs (e-NTKs). We find that, perhaps surprisingly, the expressiveness of the untrained e-NTK features is comparable to that of the features taken from pre-trained perceptual features using public data. As a result, our method improves the privacy-accuracy trade-off compared to other state-of-the-art methods, without relying on any public data, as demonstrated on several tabular and image benchmark datasets. In addition, we also extend NTK to Data Distillation (DD) in federated learning (FL) settings, where we aim to condense sensitive information into a small set of images for deep learning training in a DP manner, we show that our method obtains meaningful results even under class imbalance and spuriously correlated image datasets.
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Quantifying motor vigour in Parkinson’s disease using EEG: a dual workflow of orthogonal multiple instance learning and ICA-based analysis (2024)
This thesis investigates the application of linear and non-linear methodsfor analyzing Electroencephalogram (EEG) signals to quantify motor vigor,particularly in the context of Parkinson’s disease (PD). Traditional EEGanalysis methods often struggle with the complexity and variability of EEGdata, leading to challenges in accurately interpreting neural activity. Thisstudy explores both linear Independent Component Analysis (ICA) and advancedMultiple Instance Learning (MIL) models to enhance the robustnessand generalizability of EEG analysis.In the linear analysis, Independent Component Analysis (ICA) is employedto decompose EEG signals into statistically independent components.This method helps in isolating significant neural patterns related to motorvigor. The study also incorporates Canonical Correlation Analysis (CCA)to identify correlations between EEG embeddings and behavioral metrics.For the non-linear analysis, the research introduces an Orthogonal Spatio-Temporal Attention Network, an advanced MIL model that separately handlesspatial and temporal features of EEG data. This model improves uponconventional methods by incorporating dual attention pathways, facilitatinga more detailed and accurate capture of neural dynamics. The study utilizesa Catch-22 embedding technique to extract key temporal features forthe MIL framework.Empirical evaluations demonstrate the efficacy of both linear and nonlinearmodels in predicting motor vigor metrics, providing reliable tools forclinical assessment and monitoring of PD. The findings underscore the potentialof combining linear ICA and non-linear MIL-based approaches inneurophysiological research, offering significant improvements in the analysisand interpretation of complex EEG data.
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Incremental learning and federated learning for heterogeneous medical image analysis (2023)
Standard deep learning paradigm may not be practical over real-world heterogeneous medical data, where new disease merges over time with data acquired in a distributed manner across various hospitals. There have been approaches to facilitate the training of deep models over two primary categories of heterogeneity, including 1) class incremental learning, which offers a promising solution for sequential heterogeneity by adapting a deep network trained on previous disease classes to handle newly introduced diseases over time; 2) federated learning, which offers a promising solution for distributed heterogeneity, by training a global model on a centralized server over private datasets of various hospitals or clients without requiring them to share data. The core challenge in both approaches is catastrophic forgetting, which refers to performance degradation on previously trained data when adapting a model to available data. Due to strict patient privacy regulations, storing and sharing medical data are often discouraged, posing a significant hurdle in addressing such a forgetting. We propose to leverage medical data synthesis to recover inaccessible medical data in heterogeneous learning, presenting two distinctive novel frameworks. Our first framework introduces a novel two-step, data-free class incremental learning pipeline. Initially, it synthesizes data by inverting trained model weights on previous classes and matching statistics saved in continual normalization layers to obtain continual class-specific samples. Subsequently, the model is updated by incorporating three novel loss functions to enhance the utility of synthesized data and mitigate forgetting. Extensive experiments demonstrate that the proposed framework achieves comparative results with state-of-the-art methods on four public MedMNIST datasets and an in-house heart echocardiography dataset. We propose our second framework as a novel federated learning approach to mitigate forgetting by generating and utilizing united global synthetic data among clients. First, we proposed constrained model inversion over the server model to enforce an information-preserving property in synthetic data and leverage the global distribution captured in the globally aggregated server model. Then, we utilize this synthetic data alongside the local data to enhance the generalization capabilities of local training. Extensive experiments show that the proposed method achieves state-of-the-art performance on the BloodMNIST and Retina datasets.
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